Xiaofang Jiang
Xiaofang Jiang
We are dedicated to uncovering the hidden intricacies of the microbial world, delving into the fascinating realm of host-microbe interactions, viral genomics, and the vital role played by the gut microbiome in human health. Employing a holistic approach that combines genomics, bioinformatics, computational modeling, and deep learning, we strive to acquire a comprehensive understanding of the relationships between microorganisms and their profound influence on various biological processes. Our ultimate objective is to illuminate the enigmatic aspects that shape our microbial ecosystem, fostering groundbreaking advancements in this field.
One particular area of our focus revolves around the exploration of diverse microbial enzymes residing within the gut microbiome and their implications for human health and physiology. We dedicate significant efforts to investigating enzymes involved in bilirubin reduction to urobilinogen, a critical process for maintaining balanced bilirubin levels in the body. Through the application of cutting-edge techniques such as comparative genomics, structural modeling, and metagenomic analysis, we have made substantial strides in identifying the genetic and enzymatic factors responsible for this metabolic pathway. These findings not only deepen our understanding of the interplay between the gut microbiome and host physiology but also pave the way for innovative strategies to address bilirubin-related disorders, thereby promoting overall health.
We actively delve into the vast landscape of microbial enzymes involved in glycan interactions. Our aim is to uncover novel types of enzymes engaged in glycan synthesis and degradation. As essential macromolecules for life, glycans hold numerous secrets that we are progressively unraveling, commencing with the enzymes responsible for their synthesis and breakdown. We possess a profound interest in deciphering the intricate interactions between proteins and glycans. By unraveling the specific binding patterns and functional consequences of these interactions, we seek to comprehend the molecular language governing critical processes such as cell signaling, immune responses, and disease pathogenesis.
Latest Papers
SpiR is a gut microbial enzyme that drives cholesterol conversion
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Nature Communications
Author(s): Gabriela Arp, Sophia Levy, Angela K. Jiang, et. al
UMD Author(s): Maggie Grant, Xiaofang Jiang, Gabriela Arp
Functional analyses of bacterial NanoRNase B proteins reveals defining features of this enzyme family
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Nucleic Acids Research
Author(s): Tanner M Myers, Andrew A Burnim, Madison D Jermain, et. al
UMD Author(s): Vincent Lee, Wade Winkler, Xiaofang Jiang
Identification of gut bacteria reductases that biotransform steroid hormones
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Nature Communications
Author(s): Gabriela Arp, Angela K. Jiang, Keith Dufault-Thompson, et. al
UMD Author(s): Brantley Hall, Angela Jiang, Gabriela Arp, Xiaofang Jiang, Maggie Grant, Sophia Levy
Convergent evolution of oxidized sugar metabolism in commensal and pathogenic microbes in the inflamed gut
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Nature Communications
Author(s): Sophia Levy, Angela K. Jiang, Maggie R. Grant, et. al
UMD Author(s): Brantley Hall, Angela Jiang, Gabriela Arp, Xiaofang Jiang, Maggie Grant, Sophia Levy
Ancestral proteins trace the emergence of substrate specificity and oligomerization within bacterial DEDDy dinucleases
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BioRxiv
Author(s): Mortensen, Sofia, Burnim, Andy, Dufault-Thompson, Keith, et. al
UMD Author(s): Xiaofang Jiang
Metabolic cross-feeding of a dietary antioxidant enhances anaerobic energy metabolism by human gut bacteria
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Cell Host & Microbe
Author(s): Zhe Zhou, Angela Jiang, Xiaofang Jiang, et. al
UMD Author(s): Angela Jiang, Xiaofang Jiang
Bacterial intragenic inversions: a new layer of diversity
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Trends in Genetics
Author(s): Hall, Brantley, Jiang, Xiaofang
UMD Author(s): Xiaofang Jiang
EzSEA: an interactive web interface for enzyme sequence evolution analysis
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Bioinformatics Advances
Author(s): Angela K Jiang, Jerry Zhao, Xiaofang Jiang
UMD Author(s): Angela Jiang, Xiaofang Jiang
Augmenting microbial phylogenomic signal with tailored marker gene sets
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BioRxiv
Author(s): Secaira-Morocho, Henry, Jiang, Xiaofang, Zhu, Qiyun
UMD Author(s): Xiaofang Jiang
Bilirubin Reductase Shows Host-Specific Associations in Animal Large Intestines
Author(s): Xiaofang Jiang, Keith Dufault-Thompson, Sophia Levy, et. al
UMD Author(s): Xiaofang Jiang, Sophia Levy